ctpA protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0522	AFE_0525	AFE_0522	AFE_0525	Peptidyl-prolyl cis-trans isomerase, PPIC-type; Identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639.	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	0.410
AFE_0522	clpA	AFE_0522	AFE_0520	Peptidyl-prolyl cis-trans isomerase, PPIC-type; Identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639.	ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family.	0.557
AFE_0522	clpS	AFE_0522	AFE_0521	Peptidyl-prolyl cis-trans isomerase, PPIC-type; Identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639.	ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.611
AFE_0522	ctpA	AFE_0522	AFE_0524	Peptidyl-prolyl cis-trans isomerase, PPIC-type; Identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.632
AFE_0525	AFE_0522	AFE_0525	AFE_0522	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	Peptidyl-prolyl cis-trans isomerase, PPIC-type; Identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639.	0.410
AFE_0525	AFE_1211	AFE_0525	AFE_1211	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.744
AFE_0525	AFE_2762	AFE_0525	AFE_2762	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.774
AFE_0525	ctpA	AFE_0525	AFE_0524	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.821
AFE_0687	ctpA	AFE_0687	AFE_0524	Hypothetical protein; Identified by glimmer; putative.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.668
AFE_0711	ctpA	AFE_0711	AFE_0524	NHL repeat protein; Identified by match to protein family HMM PF01436.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.668
AFE_1211	AFE_0525	AFE_1211	AFE_0525	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	0.744
AFE_1211	AFE_2699	AFE_1211	AFE_2699	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Lipoprotein, putative; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.439
AFE_1211	AFE_2716	AFE_1211	AFE_2716	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721.	0.619
AFE_1211	AFE_2762	AFE_1211	AFE_2762	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.894
AFE_1211	ctpA	AFE_1211	AFE_0524	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.790
AFE_2699	AFE_1211	AFE_2699	AFE_1211	Lipoprotein, putative; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.439
AFE_2699	ctpA	AFE_2699	AFE_0524	Lipoprotein, putative; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.675
AFE_2716	AFE_1211	AFE_2716	AFE_1211	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.619
AFE_2716	AFE_2762	AFE_2716	AFE_2762	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.611
AFE_2716	ctpA	AFE_2716	AFE_0524	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.685