AFE_0566 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0562	AFE_0566	AFE_0562	AFE_0566	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	0.571
AFE_0562	AFE_0567	AFE_0562	AFE_0567	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	0.513
AFE_0562	gmk	AFE_0562	AFE_0563	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.934
AFE_0562	recG	AFE_0562	AFE_0568	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.	0.571
AFE_0562	rpoZ	AFE_0562	AFE_0564	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.818
AFE_0562	spoT	AFE_0562	AFE_0565	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.	0.594
AFE_0566	AFE_0562	AFE_0566	AFE_0562	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	0.571
AFE_0566	AFE_0567	AFE_0566	AFE_0567	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	0.781
AFE_0566	AFE_0569	AFE_0566	AFE_0569	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Identified by match to protein family HMM PF03734.	0.535
AFE_0566	fusA	AFE_0566	AFE_0324	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	0.582
AFE_0566	gmk	AFE_0566	AFE_0563	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.612
AFE_0566	ilvA	AFE_0566	AFE_0722	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.	0.528
AFE_0566	recG	AFE_0566	AFE_0568	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.	0.799
AFE_0566	rph	AFE_0566	AFE_2343	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.480
AFE_0566	rpoZ	AFE_0566	AFE_0564	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.616
AFE_0566	spoT	AFE_0566	AFE_0565	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.	0.763
AFE_0567	AFE_0562	AFE_0567	AFE_0562	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	yicC family protein; Identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.	0.513
AFE_0567	AFE_0566	AFE_0567	AFE_0566	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.	0.781
AFE_0567	AFE_0569	AFE_0567	AFE_0569	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	Identified by match to protein family HMM PF03734.	0.535
AFE_0567	gmk	AFE_0567	AFE_0563	Conserved hypothetical protein; Identified by similarity to GB:AAL95505.1.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.513