AFE_0611 protein (Acidithiobacillus ferrooxidans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AFE_0611

Hypothetical protein; Identified by glimmer; putative. (438 aa)

Predicted Functional Partners:

AFE_0612

0.948

AFE_0607

0.864

AFE_1755

0.604

AFE_0608

0.584

AFE_0609

0.584

AFE_0610

0.584

AFE_0620

0.552

AFE_1595

0.510

AFE_1338

0.478

AFE_2385

0.474

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0607	AFE_0608	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Hypothetical protein; Identified by glimmer; putative.	0.518
AFE_0607	AFE_0609	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.518
AFE_0607	AFE_0610	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Hypothetical protein; Identified by glimmer; putative.	0.518
AFE_0607	AFE_0611	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Hypothetical protein; Identified by glimmer; putative.	0.864
AFE_0607	AFE_0612	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.408
AFE_0607	AFE_0620	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Hypothetical protein; Identified by glimmer; putative.	0.481
AFE_0607	AFE_1755	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	Conserved hypothetical protein; Identified by similarity to GB:AAN66820.1.	0.529
AFE_0608	AFE_0607	Hypothetical protein; Identified by glimmer; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.518
AFE_0608	AFE_0609	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.773
AFE_0608	AFE_0610	Hypothetical protein; Identified by glimmer; putative.	Hypothetical protein; Identified by glimmer; putative.	0.773
AFE_0608	AFE_0611	Hypothetical protein; Identified by glimmer; putative.	Hypothetical protein; Identified by glimmer; putative.	0.584
AFE_0608	AFE_0612	Hypothetical protein; Identified by glimmer; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.584
AFE_0609	AFE_0607	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.518
AFE_0609	AFE_0608	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Hypothetical protein; Identified by glimmer; putative.	0.773
AFE_0609	AFE_0610	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Hypothetical protein; Identified by glimmer; putative.	0.777
AFE_0609	AFE_0611	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Hypothetical protein; Identified by glimmer; putative.	0.584
AFE_0609	AFE_0612	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.584
AFE_0610	AFE_0607	Hypothetical protein; Identified by glimmer; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAN66818.1.	0.518
AFE_0610	AFE_0608	Hypothetical protein; Identified by glimmer; putative.	Hypothetical protein; Identified by glimmer; putative.	0.773
AFE_0610	AFE_0609	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.777