STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE_0802Identified by match to protein family HMM PF00501. (453 aa)    
Predicted Functional Partners:
AFE_0803
Membrane protein, putative; Identified by similarity to GB:CAD13961.1.
 
     0.929
AFE_0800
Conserved hypothetical protein; Identified by similarity to GB:CAD13959.1.
 
     0.882
AFE_0799
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.853
AFE_0798
Membrane protein, putative.
 
     0.852
AFE_0795
Conserved hypothetical protein; Identified by similarity to GB:AAM43220.1.
 
   
 0.814
AFE_0797
Acyl carrier protein, putative; Identified by similarity to SP:O67611.
 
   
 0.814
AFE_0794
Conserved hypothetical protein; Identified by similarity to GB:CAD13953.1.
 
     0.802
citZ
Citrate synthase II; Identified by similarity to SP:P39120; match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family.
  
 
 0.800
AFE_0788
Non-heme halogenase, putative; Identified by similarity to GB:AAK81830.1; match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820.
 
   
 0.798
AFE_0790
Acyltransferase, putative; Identified by match to protein family HMM PF01553.
 
     0.796
Your Current Organism:
Acidithiobacillus ferrooxidans
NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270
Server load: low (22%) [HD]