AFE_1339 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0074	AFE_1339	AFE_0074	AFE_1339	Chain length determinant family protein; Identified by match to protein family HMM PF02706.	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	0.834
AFE_0074	AFE_2975	AFE_0074	AFE_2975	Chain length determinant family protein; Identified by match to protein family HMM PF02706.	Capsule polysaccharide export protein, BexD/CtrA/VexA family; Identified by similarity to SP:P22236; match to protein family HMM PF02563.	0.834
AFE_1338	AFE_1339	AFE_1338	AFE_1339	Identified by match to protein family HMM PF01569.	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	0.813
AFE_1338	AFE_1340	AFE_1338	AFE_1340	Identified by match to protein family HMM PF01569.	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	0.670
AFE_1338	galE	AFE_1338	AFE_1342	Identified by match to protein family HMM PF01569.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.572
AFE_1339	AFE_0074	AFE_1339	AFE_0074	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Chain length determinant family protein; Identified by match to protein family HMM PF02706.	0.834
AFE_1339	AFE_1338	AFE_1339	AFE_1338	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Identified by match to protein family HMM PF01569.	0.813
AFE_1339	AFE_1340	AFE_1339	AFE_1340	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	0.995
AFE_1339	AFE_1370	AFE_1339	AFE_1370	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Undecaprenyl-phosphate galactosephosphotransferase, putative; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.667
AFE_1339	AFE_2961	AFE_1339	AFE_2961	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Capsule polysaccharide export inner-membrane protein; Identified by similarity to SP:P32014.	0.816
AFE_1339	AFE_2975	AFE_1339	AFE_2975	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Capsule polysaccharide export protein, BexD/CtrA/VexA family; Identified by similarity to SP:P22236; match to protein family HMM PF02563.	0.911
AFE_1339	AFE_3012	AFE_1339	AFE_3012	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Capsule polysaccharide biosynthesis protein; Identified by match to protein family HMM PF05159.	0.843
AFE_1339	ctrC	AFE_1339	AFE_2962	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Capsule polysaccharide exporter, inner-membrane protein CtrC; Identified by similarity to SP:P32015; match to protein family HMM PF01061.	0.804
AFE_1339	ctrD	AFE_1339	AFE_2963	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	Capsule polysaccharide exporter, ATP-binding protein; Identified by similarity to SP:P32016; match to protein family HMM PF00005.	0.807
AFE_1339	galE	AFE_1339	AFE_1342	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.687
AFE_1340	AFE_1338	AFE_1340	AFE_1338	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	Identified by match to protein family HMM PF01569.	0.670
AFE_1340	AFE_1339	AFE_1340	AFE_1339	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	Polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.	0.995
AFE_1340	AFE_1370	AFE_1340	AFE_1370	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	Undecaprenyl-phosphate galactosephosphotransferase, putative; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.930
AFE_1340	AFE_2975	AFE_1340	AFE_2975	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	Capsule polysaccharide export protein, BexD/CtrA/VexA family; Identified by similarity to SP:P22236; match to protein family HMM PF02563.	0.973
AFE_1340	galE	AFE_1340	AFE_1342	Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.867