AFE_1357 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0073	AFE_1344	AFE_0073	AFE_1344	Undecaprenyl-phosphate galactosephosphotransferase; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	0.414
AFE_0073	AFE_1357	AFE_0073	AFE_1357	Undecaprenyl-phosphate galactosephosphotransferase; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.663
AFE_0073	mtfA	AFE_0073	AFE_0081	Undecaprenyl-phosphate galactosephosphotransferase; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Mannosyltransferase; Identified by similarity to GB:AAF04384.1; match to protein family HMM PF00534.	0.588
AFE_1344	AFE_0073	AFE_1344	AFE_0073	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Undecaprenyl-phosphate galactosephosphotransferase; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.414
AFE_1344	AFE_1351	AFE_1344	AFE_1351	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.615
AFE_1344	AFE_1354	AFE_1344	AFE_1354	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.635
AFE_1344	AFE_1355	AFE_1344	AFE_1355	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.568
AFE_1344	AFE_1357	AFE_1344	AFE_1357	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.619
AFE_1344	AFE_1370	AFE_1344	AFE_1370	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	Undecaprenyl-phosphate galactosephosphotransferase, putative; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.414
AFE_1351	AFE_1344	AFE_1351	AFE_1344	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	0.615
AFE_1351	AFE_1354	AFE_1351	AFE_1354	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.840
AFE_1351	AFE_1355	AFE_1351	AFE_1355	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.839
AFE_1351	AFE_1357	AFE_1351	AFE_1357	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.670
AFE_1351	AFE_1358	AFE_1351	AFE_1358	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Hypothetical protein; Identified by glimmer; putative.	0.442
AFE_1351	AFE_1359	AFE_1351	AFE_1359	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Nucleotidyltransferase, putative; Identified by match to protein family HMM PF01909.	0.442
AFE_1351	AFE_1360	AFE_1351	AFE_1360	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Conserved hypothetical protein; Identified by similarity to GB:CAE06995.1; match to protein family HMM PF05168.	0.442
AFE_1354	AFE_1344	AFE_1354	AFE_1344	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.	0.635
AFE_1354	AFE_1351	AFE_1354	AFE_1351	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.840
AFE_1354	AFE_1355	AFE_1354	AFE_1355	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	0.840
AFE_1354	AFE_1357	AFE_1354	AFE_1357	Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.688