AFE_1518 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_1508	AFE_1511	AFE_1508	AFE_1511	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	0.701
AFE_1508	AFE_1514	AFE_1508	AFE_1514	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Conserved hypothetical protein; Identified by similarity to GB:BAC47013.1; match to protein family HMM PF03270; match to protein family HMM TIGR02935.	0.560
AFE_1508	AFE_1518	AFE_1508	AFE_1518	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Ferredoxin, putative; Identified by match to protein family HMM PF00111.	0.938
AFE_1508	AFE_1519	AFE_1508	AFE_1519	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Ferredoxin; Identified by similarity to SP:P37097; match to protein family HMM PF00111.	0.934
AFE_1508	AFE_3010	AFE_1508	AFE_3010	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.633
AFE_1508	nifE	AFE_1508	AFE_1517	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Nitrogenase MoFe cofactor biosynthesis protein NifE; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01283; Belongs to the NifD/NifK/NifE/NifN family.	0.455
AFE_1508	nifN	AFE_1508	AFE_1516	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01285; Belongs to the NifD/NifK/NifE/NifN family.	0.454
AFE_1508	nifW	AFE_1508	AFE_1504	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	nifW protein, putative; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.	0.861
AFE_1508	nifX	AFE_1508	AFE_1515	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Nitrogen fixation protein NifX; Identified by similarity to SP:P19078; match to protein family HMM PF02579; match to protein family HMM TIGR02663.	0.650
AFE_1511	AFE_1508	AFE_1511	AFE_1508	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.701
AFE_1511	AFE_1514	AFE_1511	AFE_1514	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Conserved hypothetical protein; Identified by similarity to GB:BAC47013.1; match to protein family HMM PF03270; match to protein family HMM TIGR02935.	0.915
AFE_1511	AFE_1518	AFE_1511	AFE_1518	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Ferredoxin, putative; Identified by match to protein family HMM PF00111.	0.930
AFE_1511	AFE_1519	AFE_1511	AFE_1519	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Ferredoxin; Identified by similarity to SP:P37097; match to protein family HMM PF00111.	0.935
AFE_1511	AFE_1543	AFE_1511	AFE_1543	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Conserved hypothetical protein; Identified by similarity to GB:AAF61911.1.	0.770
AFE_1511	nifE	AFE_1511	AFE_1517	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Nitrogenase MoFe cofactor biosynthesis protein NifE; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01283; Belongs to the NifD/NifK/NifE/NifN family.	0.825
AFE_1511	nifN	AFE_1511	AFE_1516	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01285; Belongs to the NifD/NifK/NifE/NifN family.	0.823
AFE_1511	nifW	AFE_1511	AFE_1504	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	nifW protein, putative; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.	0.900
AFE_1511	nifX	AFE_1511	AFE_1515	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	Nitrogen fixation protein NifX; Identified by similarity to SP:P19078; match to protein family HMM PF02579; match to protein family HMM TIGR02663.	0.923
AFE_1514	AFE_1508	AFE_1514	AFE_1508	Conserved hypothetical protein; Identified by similarity to GB:BAC47013.1; match to protein family HMM PF03270; match to protein family HMM TIGR02935.	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.560
AFE_1514	AFE_1511	AFE_1514	AFE_1511	Conserved hypothetical protein; Identified by similarity to GB:BAC47013.1; match to protein family HMM PF03270; match to protein family HMM TIGR02935.	Nitrogen fixation protein NifQ; Identified by match to protein family HMM PF04891.	0.915