Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFE_1457 | AFE_1540 | AFE_1457 | AFE_1540 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.871 |
AFE_1457 | rfbB | AFE_1457 | AFE_0441 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. | dTDP-glucose 4,6-dehydratase; Identified by similarity to SP:P55295; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.794 |
AFE_1533 | AFE_1534 | AFE_1533 | AFE_1534 | Conserved hypothetical protein; Identified by similarity to SP:P23177. | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | 0.952 |
AFE_1533 | AFE_1536 | AFE_1533 | AFE_1536 | Conserved hypothetical protein; Identified by similarity to SP:P23177. | NifZ domain protein. | 0.952 |
AFE_1533 | AFE_1538 | AFE_1533 | AFE_1538 | Conserved hypothetical protein; Identified by similarity to SP:P23177. | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | 0.923 |
AFE_1533 | AFE_1539 | AFE_1533 | AFE_1539 | Conserved hypothetical protein; Identified by similarity to SP:P23177. | Conserved hypothetical protein; Identified by similarity to GB:AAA64714.1. | 0.939 |
AFE_1533 | AFE_1540 | AFE_1533 | AFE_1540 | Conserved hypothetical protein; Identified by similarity to SP:P23177. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.813 |
AFE_1534 | AFE_1533 | AFE_1534 | AFE_1533 | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | Conserved hypothetical protein; Identified by similarity to SP:P23177. | 0.952 |
AFE_1534 | AFE_1536 | AFE_1534 | AFE_1536 | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | NifZ domain protein. | 0.952 |
AFE_1534 | AFE_1538 | AFE_1534 | AFE_1538 | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | 0.941 |
AFE_1534 | AFE_1539 | AFE_1534 | AFE_1539 | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | Conserved hypothetical protein; Identified by similarity to GB:AAA64714.1. | 0.928 |
AFE_1534 | AFE_1540 | AFE_1534 | AFE_1540 | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.823 |
AFE_1536 | AFE_1533 | AFE_1536 | AFE_1533 | NifZ domain protein. | Conserved hypothetical protein; Identified by similarity to SP:P23177. | 0.952 |
AFE_1536 | AFE_1534 | AFE_1536 | AFE_1534 | NifZ domain protein. | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | 0.952 |
AFE_1536 | AFE_1538 | AFE_1536 | AFE_1538 | NifZ domain protein. | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | 0.908 |
AFE_1536 | AFE_1539 | AFE_1536 | AFE_1539 | NifZ domain protein. | Conserved hypothetical protein; Identified by similarity to GB:AAA64714.1. | 0.940 |
AFE_1536 | AFE_1540 | AFE_1536 | AFE_1540 | NifZ domain protein. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.828 |
AFE_1538 | AFE_1533 | AFE_1538 | AFE_1533 | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | Conserved hypothetical protein; Identified by similarity to SP:P23177. | 0.923 |
AFE_1538 | AFE_1534 | AFE_1538 | AFE_1534 | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | Leucine rich repeat protein; Identified by match to protein family HMM PF01816. | 0.941 |
AFE_1538 | AFE_1536 | AFE_1538 | AFE_1536 | Nitrogen fixation protein, putative; Identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934. | NifZ domain protein. | 0.908 |
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