AFE_1607 protein (Acidithiobacillus ferrooxidans)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Score

AFE_1607

Secretion protein, HlyD family; Identified by match to protein family HMM PF00529. (331 aa)

Predicted Functional Partners:

AFE_1604

0.943

AFE_1603

0.942

AFE_1606

0.940

AFE_1605

0.934

AFE_2864

0.776

AFE_2863

0.774

AFE_2862

0.750

AFE_0654

0.583

AFE_3264

0.578

AFE_2103

0.538

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0654	AFE_1607	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.583
AFE_0654	AFE_2103	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.715
AFE_0654	AFE_3264	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.715
AFE_1603	AFE_1604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.804
AFE_1603	AFE_1605	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.995
AFE_1603	AFE_1606	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.995
AFE_1603	AFE_1607	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.942
AFE_1603	AFE_2862	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.977
AFE_1604	AFE_1603	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.804
AFE_1604	AFE_1605	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.994
AFE_1604	AFE_1606	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.995
AFE_1604	AFE_1607	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.943
AFE_1604	AFE_2862	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.981
AFE_1605	AFE_1603	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.995
AFE_1605	AFE_1604	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.994
AFE_1605	AFE_1606	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.778
AFE_1605	AFE_1607	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.934
AFE_1605	AFE_2863	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.981
AFE_1605	AFE_2864	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.981
AFE_1606	AFE_1603	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.995