AFE_1723 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0154	AFE_1499	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	ATPase, AAA family; Identified by match to protein family HMM PF00004.	0.802
AFE_0154	AFE_1502	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	0.884
AFE_0154	AFE_1723	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	0.572
AFE_0154	AFE_2534	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Identified by match to protein family HMM PF00850.	0.806
AFE_0154	AFE_3010	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.826
AFE_1499	AFE_0154	ATPase, AAA family; Identified by match to protein family HMM PF00004.	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.802
AFE_1499	AFE_1502	ATPase, AAA family; Identified by match to protein family HMM PF00004.	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	0.930
AFE_1499	AFE_1723	ATPase, AAA family; Identified by match to protein family HMM PF00004.	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	0.434
AFE_1499	AFE_2534	ATPase, AAA family; Identified by match to protein family HMM PF00004.	Identified by match to protein family HMM PF00850.	0.958
AFE_1499	AFE_3010	ATPase, AAA family; Identified by match to protein family HMM PF00004.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.912
AFE_1502	AFE_0154	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.884
AFE_1502	AFE_1499	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	ATPase, AAA family; Identified by match to protein family HMM PF00004.	0.930
AFE_1502	AFE_1723	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	0.445
AFE_1502	AFE_2534	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	Identified by match to protein family HMM PF00850.	0.865
AFE_1502	AFE_3010	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.988
AFE_1723	AFE_0154	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.572
AFE_1723	AFE_1499	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	ATPase, AAA family; Identified by match to protein family HMM PF00004.	0.434
AFE_1723	AFE_1502	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	Ankyrin repeat protein/rhodanese-like domain protein; Identified by match to protein family HMM PF00023; match to protein family HMM PF00581.	0.445
AFE_1723	AFE_1724	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	Hypothetical protein; Identified by glimmer; putative.	0.518
AFE_1723	AFE_2534	Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.	Identified by match to protein family HMM PF00850.	0.615