AFE_1892 protein (Acidithiobacillus ferrooxidans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0966	AFE_1892	AFE_0966	AFE_1892	Conserved hypothetical protein.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.483
AFE_0966	AFE_2120	AFE_0966	AFE_2120	Conserved hypothetical protein.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.	0.927
AFE_1761	AFE_1892	AFE_1761	AFE_1892	Conserved hypothetical protein; Identified by similarity to GB:AAQ60975.1.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.831
AFE_1761	hemN	AFE_1761	AFE_0134	Conserved hypothetical protein; Identified by similarity to GB:AAQ60975.1.	Oxygen-independent coproporphyrinogen III oxidase; Identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.444
AFE_1892	AFE_0966	AFE_1892	AFE_0966	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Conserved hypothetical protein.	0.483
AFE_1892	AFE_1761	AFE_1892	AFE_1761	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Conserved hypothetical protein; Identified by similarity to GB:AAQ60975.1.	0.831
AFE_1892	AFE_1893	AFE_1892	AFE_1893	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.684
AFE_1892	AFE_1894	AFE_1892	AFE_1894	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Conserved hypothetical protein; Identified by match to protein family HMM PF00994.	0.459
AFE_1892	AFE_2120	AFE_1892	AFE_2120	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.	0.489
AFE_1892	hemN	AFE_1892	AFE_0134	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Oxygen-independent coproporphyrinogen III oxidase; Identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.565
AFE_1892	ppk	AFE_1892	AFE_1876	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.	0.973
AFE_1892	ppx	AFE_1892	AFE_1441	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	Exopolyphosphatase; Identified by similarity to SP:Q9ZN70; match to protein family HMM PF02541.	0.813
AFE_1893	AFE_1892	AFE_1893	AFE_1892	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.684
AFE_1893	AFE_1894	AFE_1893	AFE_1894	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Conserved hypothetical protein; Identified by match to protein family HMM PF00994.	0.526
AFE_1894	AFE_1892	AFE_1894	AFE_1892	Conserved hypothetical protein; Identified by match to protein family HMM PF00994.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.459
AFE_1894	AFE_1893	AFE_1894	AFE_1893	Conserved hypothetical protein; Identified by match to protein family HMM PF00994.	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.526
AFE_2120	AFE_0966	AFE_2120	AFE_0966	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.	Conserved hypothetical protein.	0.927
AFE_2120	AFE_1892	AFE_2120	AFE_1892	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.489
hemN	AFE_1761	AFE_0134	AFE_1761	Oxygen-independent coproporphyrinogen III oxidase; Identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Conserved hypothetical protein; Identified by similarity to GB:AAQ60975.1.	0.444
hemN	AFE_1892	AFE_0134	AFE_1892	Oxygen-independent coproporphyrinogen III oxidase; Identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Conserved hypothetical protein; Identified by similarity to PIR:E83627; match to protein family HMM PF03976.	0.565