AFE_1956 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_1956	AFE_1957	AFE_1956	AFE_1957	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Conserved hypothetical protein; Identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357.	0.777
AFE_1956	AFE_1958	AFE_1956	AFE_1958	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.781
AFE_1956	AFE_2148	AFE_1956	AFE_2148	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	DNA-binding protein, putative; Identified by similarity to GB:AAO56394.1; match to protein family HMM PF01381; match to protein family HMM PF07883.	0.519
AFE_1956	AFE_2601	AFE_1956	AFE_2601	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.	0.651
AFE_1956	AFE_3118	AFE_1956	AFE_3118	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.	0.651
AFE_1956	fur-2	AFE_1956	AFE_1955	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.	0.555
AFE_1956	gcvT	AFE_1956	AFE_0979	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Glycine cleavage system T protein; Identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528.	0.729
AFE_1956	gltB	AFE_1956	AFE_0730	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Glutamate synthase, large subunit; Identified by similarity to SP:P09831; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.458
AFE_1956	thiG	AFE_1956	AFE_0643	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Thiamin biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.	0.995
AFE_1956	thiS	AFE_1956	AFE_0642	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.	0.652
AFE_1957	AFE_1956	AFE_1957	AFE_1956	Conserved hypothetical protein; Identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357.	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	0.777
AFE_1957	AFE_1958	AFE_1957	AFE_1958	Conserved hypothetical protein; Identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357.	Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.998
AFE_1957	fur-2	AFE_1957	AFE_1955	Conserved hypothetical protein; Identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357.	Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.	0.514
AFE_1958	AFE_1956	AFE_1958	AFE_1956	Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	0.781
AFE_1958	AFE_1957	AFE_1958	AFE_1957	Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	Conserved hypothetical protein; Identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357.	0.998
AFE_1958	fur-2	AFE_1958	AFE_1955	Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.	0.511
AFE_2148	AFE_1956	AFE_2148	AFE_1956	DNA-binding protein, putative; Identified by similarity to GB:AAO56394.1; match to protein family HMM PF01381; match to protein family HMM PF07883.	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	0.519
AFE_2148	gltB	AFE_2148	AFE_0730	DNA-binding protein, putative; Identified by similarity to GB:AAO56394.1; match to protein family HMM PF01381; match to protein family HMM PF07883.	Glutamate synthase, large subunit; Identified by similarity to SP:P09831; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.446
AFE_2601	AFE_1956	AFE_2601	AFE_1956	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	0.651
AFE_3118	AFE_1956	AFE_3118	AFE_1956	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.	0.651