AFE_2085 protein (Acidithiobacillus ferrooxidans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AFE_2085

Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1. (213 aa)

Predicted Functional Partners:

AFE_3103

0.979

AFE_2083

0.473

AFE_2086

0.468

AFE_2087

0.468

AFE_2081

0.460

AFE_3280

0.412

AFE_2088

0.408

AFE_2082

0.401

AFE_2084

0.401

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_2081	AFE_2082	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	0.999
AFE_2081	AFE_2083	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.895
AFE_2081	AFE_2084	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	0.812
AFE_2081	AFE_2085	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	0.460
AFE_2082	AFE_2081	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	0.999
AFE_2082	AFE_2083	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.992
AFE_2082	AFE_2084	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	0.872
AFE_2082	AFE_2085	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	0.401
AFE_2083	AFE_2081	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	0.895
AFE_2083	AFE_2082	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	0.992
AFE_2083	AFE_2084	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	0.986
AFE_2083	AFE_2085	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	0.473
AFE_2084	AFE_2081	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	0.812
AFE_2084	AFE_2082	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	0.872
AFE_2084	AFE_2083	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.986
AFE_2084	AFE_2085	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	0.401
AFE_2085	AFE_2081	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401.	0.460
AFE_2085	AFE_2082	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.	0.401
AFE_2085	AFE_2083	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.	0.473
AFE_2085	AFE_2084	Conserved hypothetical protein; Identified by similarity to GB:AAM31475.1.	Conserved hypothetical protein; Identified by similarity to GB:AAL63368.1.	0.401