AFE_2267 protein (Acidithiobacillus ferrooxidans)

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AFE_2267

Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409. (523 aa)

Predicted Functional Partners:

AFE_2268

0.819

AFE_3230

0.754

AFE_2292

0.716

AFE_2935

0.716

AFE_2040

0.710

AFE_3229

0.693

AFE_0770

0.684

AFE_0967

0.671

AFE_0763

0.665

AFE_2998

0.661

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0763	AFE_0770	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM TIGR01352.	0.856
AFE_0763	AFE_0967	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	0.654
AFE_0763	AFE_2267	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.665
AFE_0763	AFE_2268	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM TIGR01352.	0.727
AFE_0763	AFE_3230	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Hypothetical protein; Identified by glimmer; putative.	0.705
AFE_0770	AFE_0763	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.856
AFE_0770	AFE_0967	Identified by match to protein family HMM TIGR01352.	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	0.672
AFE_0770	AFE_2040	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.822
AFE_0770	AFE_2267	Identified by match to protein family HMM TIGR01352.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.684
AFE_0770	AFE_2292	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.784
AFE_0770	AFE_2935	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.841
AFE_0770	AFE_2998	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.835
AFE_0770	AFE_3229	Identified by match to protein family HMM TIGR01352.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.830
AFE_0770	AFE_3230	Identified by match to protein family HMM TIGR01352.	Hypothetical protein; Identified by glimmer; putative.	0.736
AFE_0967	AFE_0763	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.654
AFE_0967	AFE_0770	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	Identified by match to protein family HMM TIGR01352.	0.672
AFE_0967	AFE_2040	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.771
AFE_0967	AFE_2267	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.671
AFE_0967	AFE_2268	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	Identified by match to protein family HMM TIGR01352.	0.663
AFE_0967	AFE_2292	Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.773