AFE_2268 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AFE_2268

Identified by match to protein family HMM TIGR01352. (237 aa)

Predicted Functional Partners:

AFE_2269

0.862

AFE_2270

0.855

AFE_2040

0.819

AFE_2267

0.819

AFE_2292

0.816

AFE_2935

0.779

AFE_3229

0.736

AFE_2298

0.727

AFE_0763

0.722

AFE_1497

0.712

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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... protein annotations:

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0763	AFE_2267	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.665
AFE_0763	AFE_2268	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM TIGR01352.	0.722
AFE_0763	AFE_2270	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.412
AFE_1497	AFE_2040	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.770
AFE_1497	AFE_2267	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.635
AFE_1497	AFE_2268	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	Identified by match to protein family HMM TIGR01352.	0.712
AFE_1497	AFE_2292	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.774
AFE_1497	AFE_2298	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.766
AFE_1497	AFE_2935	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.710
AFE_2040	AFE_1497	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	0.770
AFE_2040	AFE_2267	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	0.710
AFE_2040	AFE_2268	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	Identified by match to protein family HMM TIGR01352.	0.819
AFE_2040	AFE_2298	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.762
AFE_2267	AFE_0763	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	TonB-dependent receptor, putative; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.665
AFE_2267	AFE_1497	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	Conserved hypothetical protein; Identified by match to protein family HMM PF03573.	0.635
AFE_2267	AFE_2040	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.710
AFE_2267	AFE_2268	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	Identified by match to protein family HMM TIGR01352.	0.819
AFE_2267	AFE_2269	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.553
AFE_2267	AFE_2270	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.622
AFE_2267	AFE_2292	Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.	TonB-dependent receptor; Identified by match to protein family HMM PF00593.	0.716