AFE_2304 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AFE_2304

Identified by match to protein family HMM TIGR01352. (259 aa)

Predicted Functional Partners:

AFE_2303

0.814

AFE_2300

0.786

AFE_2299

0.718

AFE_2302

0.674

AFE_2305

0.651

AFE_2298

0.644

AFE_1492

0.630

AFE_0769

0.587

AFE_2269

0.585

AFE_1486

0.577

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0769	AFE_2299	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.860
AFE_0769	AFE_2304	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	Identified by match to protein family HMM TIGR01352.	0.587
AFE_1486	AFE_1492	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.727
AFE_1486	AFE_2299	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.858
AFE_1486	AFE_2304	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	Identified by match to protein family HMM TIGR01352.	0.577
AFE_1492	AFE_1486	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.727
AFE_1492	AFE_2304	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM TIGR01352.	0.630
AFE_2269	AFE_2299	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.861
AFE_2269	AFE_2304	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	Identified by match to protein family HMM TIGR01352.	0.585
AFE_2298	AFE_2299	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.696
AFE_2298	AFE_2300	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.625
AFE_2298	AFE_2302	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.624
AFE_2298	AFE_2304	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Identified by match to protein family HMM TIGR01352.	0.644
AFE_2298	AFE_2305	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	Hypothetical protein; Identified by glimmer; putative.	0.472
AFE_2299	AFE_0769	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.860
AFE_2299	AFE_1486	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.858
AFE_2299	AFE_2269	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.861
AFE_2299	AFE_2298	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.696
AFE_2299	AFE_2300	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.958
AFE_2299	AFE_2302	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.688