AFE_2520 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_2518	AFE_2520	AFE_2518	AFE_2520	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM PF00877.	0.517
AFE_2520	AFE_2518	AFE_2520	AFE_2518	Identified by match to protein family HMM PF00877.	Hypothetical protein; Identified by glimmer; putative.	0.517
AFE_2520	AFE_2521	AFE_2520	AFE_2521	Identified by match to protein family HMM PF00877.	Hypothetical protein; Identified by glimmer; putative.	0.572
AFE_2520	AFE_2751	AFE_2520	AFE_2751	Identified by match to protein family HMM PF00877.	Cell division protein FtsX, putative; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.758
AFE_2520	ctpA	AFE_2520	AFE_0524	Identified by match to protein family HMM PF00877.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.548
AFE_2520	ftsE	AFE_2520	AFE_2752	Identified by match to protein family HMM PF00877.	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.480
AFE_2520	murI	AFE_2520	AFE_2842	Identified by match to protein family HMM PF00877.	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	0.490
AFE_2521	AFE_2520	AFE_2521	AFE_2520	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM PF00877.	0.572
AFE_2751	AFE_2520	AFE_2751	AFE_2520	Cell division protein FtsX, putative; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Identified by match to protein family HMM PF00877.	0.758
AFE_2751	ftsE	AFE_2751	AFE_2752	Cell division protein FtsX, putative; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.999
ctpA	AFE_2520	AFE_0524	AFE_2520	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	Identified by match to protein family HMM PF00877.	0.548
ftsE	AFE_2520	AFE_2752	AFE_2520	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	Identified by match to protein family HMM PF00877.	0.480
ftsE	AFE_2751	AFE_2752	AFE_2751	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	Cell division protein FtsX, putative; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.999
murI	AFE_2520	AFE_2842	AFE_2520	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Identified by match to protein family HMM PF00877.	0.490