AFE_2540 protein (Acidithiobacillus ferrooxidans)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AFE_2540

Identified by match to protein family HMM PF03099. (303 aa)

Predicted Functional Partners:

pdhC

0.974

AFE_2549

0.860

AFE_0958

0.806

AFE_2543

0.806

gcvH-2

0.803

AFE_2546

0.801

AFE_2553

0.792

AFE_2552

0.791

AFE_2548

0.790

AFE_2555

0.785

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0958	AFE_2540	AFE_0958	AFE_2540	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Identified by match to protein family HMM PF03099.	0.806
AFE_0958	AFE_2543	AFE_0958	AFE_2543	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.578
AFE_0958	AFE_2546	AFE_0958	AFE_2546	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.585
AFE_0958	AFE_2548	AFE_0958	AFE_2548	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Conserved hypothetical protein; Identified by similarity to PIR:A83048.	0.498
AFE_0958	AFE_2549	AFE_0958	AFE_2549	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Glycine cleavage system protein H, putative; Identified by similarity to SP:P23884; match to protein family HMM PF01597.	0.963
AFE_0958	AFE_2552	AFE_0958	AFE_2552	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Conserved hypothetical protein; Identified by similarity to PIR:H70335.	0.485
AFE_0958	AFE_2553	AFE_0958	AFE_2553	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to PIR:G70335; match to protein family HMM PF00070; match to protein family HMM PF07992.	0.413
AFE_0958	AFE_2555	AFE_0958	AFE_2555	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037.	0.470
AFE_0958	gcvH-2	AFE_0958	AFE_2547	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Glycine cleavage system H protein, putative; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.	0.964
AFE_0958	pdhC	AFE_0958	AFE_3068	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	Pyruvate dehydrogenase complex, E2 and E3 components; Dihydrolipoamide acetyltransferase/dihydrolipoamide dehydrogenase; identified by similarity to PIR:C59237; match to protein family HMM PF00070; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.983
AFE_2540	AFE_0958	AFE_2540	AFE_0958	Identified by match to protein family HMM PF03099.	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.806
AFE_2540	AFE_2543	AFE_2540	AFE_2543	Identified by match to protein family HMM PF03099.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.806
AFE_2540	AFE_2546	AFE_2540	AFE_2546	Identified by match to protein family HMM PF03099.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.801
AFE_2540	AFE_2548	AFE_2540	AFE_2548	Identified by match to protein family HMM PF03099.	Conserved hypothetical protein; Identified by similarity to PIR:A83048.	0.790
AFE_2540	AFE_2549	AFE_2540	AFE_2549	Identified by match to protein family HMM PF03099.	Glycine cleavage system protein H, putative; Identified by similarity to SP:P23884; match to protein family HMM PF01597.	0.860
AFE_2540	AFE_2552	AFE_2540	AFE_2552	Identified by match to protein family HMM PF03099.	Conserved hypothetical protein; Identified by similarity to PIR:H70335.	0.791
AFE_2540	AFE_2553	AFE_2540	AFE_2553	Identified by match to protein family HMM PF03099.	Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to PIR:G70335; match to protein family HMM PF00070; match to protein family HMM PF07992.	0.792
AFE_2540	AFE_2555	AFE_2540	AFE_2555	Identified by match to protein family HMM PF03099.	Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037.	0.785
AFE_2540	gcvH-2	AFE_2540	AFE_2547	Identified by match to protein family HMM PF03099.	Glycine cleavage system H protein, putative; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.	0.803
AFE_2540	pdhC	AFE_2540	AFE_3068	Identified by match to protein family HMM PF03099.	Pyruvate dehydrogenase complex, E2 and E3 components; Dihydrolipoamide acetyltransferase/dihydrolipoamide dehydrogenase; identified by similarity to PIR:C59237; match to protein family HMM PF00070; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.974