AFE_2604 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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Score

AFE_2604

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (307 aa)

Predicted Functional Partners:

AFE_2605

0.786

AFE_2863

0.714

AFE_1604

0.699

AFE_2864

0.674

AFE_1603

0.626

rpsK

0.609

rpsE

0.558

cysS

0.522

gcp

0.483

AFE_3010

0.483

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_1603	AFE_1604	AFE_1603	AFE_1604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.804
AFE_1603	AFE_2604	AFE_1603	AFE_2604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.626
AFE_1603	AFE_3010	AFE_1603	AFE_3010	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.463
AFE_1604	AFE_1603	AFE_1604	AFE_1603	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.804
AFE_1604	AFE_2604	AFE_1604	AFE_2604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.699
AFE_1604	AFE_3010	AFE_1604	AFE_3010	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.463
AFE_2604	AFE_1603	AFE_2604	AFE_1603	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.626
AFE_2604	AFE_1604	AFE_2604	AFE_1604	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.699
AFE_2604	AFE_2605	AFE_2604	AFE_2605	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative.	0.786
AFE_2604	AFE_2863	AFE_2604	AFE_2863	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.714
AFE_2604	AFE_2864	AFE_2604	AFE_2864	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.674
AFE_2604	AFE_3010	AFE_2604	AFE_3010	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.483
AFE_2604	cysS	AFE_2604	AFE_2221	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	cysteinyl-tRNA synthetase; Identified by similarity to SP:P21888; match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.522
AFE_2604	gcp	AFE_2604	AFE_0123	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	0.483
AFE_2604	rpsE	AFE_2604	AFE_0344	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.558
AFE_2604	rpsK	AFE_2604	AFE_0352	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.609
AFE_2605	AFE_2604	AFE_2605	AFE_2604	ABC transporter, permease protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.786
AFE_2863	AFE_2604	AFE_2863	AFE_2604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.714
AFE_2863	AFE_2864	AFE_2863	AFE_2864	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.814
AFE_2863	AFE_3010	AFE_2863	AFE_3010	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.463