| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFE_0463 | coaE | AFE_0463 | AFE_0187 | formamidopyrimidine-DNA glycosylase, putative; Identified by match to protein family HMM PF06831; Belongs to the FPG family. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.530 |
| AFE_0463 | mutM | AFE_0463 | AFE_2758 | formamidopyrimidine-DNA glycosylase, putative; Identified by match to protein family HMM PF06831; Belongs to the FPG family. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.928 |
| AFE_0463 | polI | AFE_0463 | AFE_3094 | formamidopyrimidine-DNA glycosylase, putative; Identified by match to protein family HMM PF06831; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.618 |
| AFE_2756 | AFE_2762 | AFE_2756 | AFE_2762 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.668 |
| AFE_2756 | AFE_2763 | AFE_2756 | AFE_2763 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | Outer membrane lipoprotein LolB, putative; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.604 |
| AFE_2756 | hemA | AFE_2756 | AFE_2761 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.737 |
| AFE_2756 | ispE | AFE_2756 | AFE_2764 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.547 |
| AFE_2756 | mutM | AFE_2756 | AFE_2758 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.737 |
| AFE_2756 | prfA | AFE_2756 | AFE_2760 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.780 |
| AFE_2756 | prmC | AFE_2756 | AFE_2759 | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.737 |
| AFE_2762 | AFE_2756 | AFE_2762 | AFE_2756 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | 0.668 |
| AFE_2762 | AFE_2763 | AFE_2762 | AFE_2763 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Outer membrane lipoprotein LolB, putative; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.836 |
| AFE_2762 | hemA | AFE_2762 | AFE_2761 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.652 |
| AFE_2762 | ispE | AFE_2762 | AFE_2764 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.805 |
| AFE_2762 | mutM | AFE_2762 | AFE_2758 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.594 |
| AFE_2762 | polI | AFE_2762 | AFE_3094 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.426 |
| AFE_2762 | prfA | AFE_2762 | AFE_2760 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.682 |
| AFE_2762 | prmC | AFE_2762 | AFE_2759 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.623 |
| AFE_2763 | AFE_2756 | AFE_2763 | AFE_2756 | Outer membrane lipoprotein LolB, putative; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Conserved hypothetical protein; Identified by similarity to PIR:F83597. | 0.604 |
| AFE_2763 | AFE_2762 | AFE_2763 | AFE_2762 | Outer membrane lipoprotein LolB, putative; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.836 |
