AFE_2762 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0266	AFE_1211	AFE_0266	AFE_1211	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03469.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.794
AFE_0266	AFE_2762	AFE_0266	AFE_2762	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03469.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.767
AFE_0525	AFE_1211	AFE_0525	AFE_1211	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.744
AFE_0525	AFE_2762	AFE_0525	AFE_2762	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.774
AFE_0525	ctpA	AFE_0525	AFE_0524	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.821
AFE_1211	AFE_0266	AFE_1211	AFE_0266	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03469.	0.794
AFE_1211	AFE_0525	AFE_1211	AFE_0525	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.	0.744
AFE_1211	AFE_1396	AFE_1211	AFE_1396	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Serine protease, DO/DeqQ family; Identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	0.761
AFE_1211	AFE_1646	AFE_1211	AFE_1646	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.	0.761
AFE_1211	AFE_2762	AFE_1211	AFE_2762	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.894
AFE_1211	AFE_2849	AFE_1211	AFE_2849	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAN67052.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	0.761
AFE_1211	AFE_2952	AFE_1211	AFE_2952	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Hypothetical protein; Identified by glimmer; putative.	0.833
AFE_1211	ctpA	AFE_1211	AFE_0524	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	Carboxy-terminal peptidase; Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.	0.790
AFE_1396	AFE_1211	AFE_1396	AFE_1211	Serine protease, DO/DeqQ family; Identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.761
AFE_1396	AFE_1646	AFE_1396	AFE_1646	Serine protease, DO/DeqQ family; Identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.	0.905
AFE_1396	AFE_2762	AFE_1396	AFE_2762	Serine protease, DO/DeqQ family; Identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.821
AFE_1646	AFE_1211	AFE_1646	AFE_1211	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.	TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.761
AFE_1646	AFE_1396	AFE_1646	AFE_1396	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.	Serine protease, DO/DeqQ family; Identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.	0.905
AFE_1646	AFE_2762	AFE_1646	AFE_2762	Serine protease, DO/DeqQ family; Identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.808
AFE_2762	AFE_0266	AFE_2762	AFE_0266	TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03469.	0.767