ssb-1 protein (Acidithiobacillus ferrooxidans)

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ssb-1

Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (156 aa)

Predicted Functional Partners:

holC

0.933

ssb-2

0.902

ssb-3

0.901

priA

0.822

polI

0.812

rpsF

0.802

dnaX

0.792

rplU

0.734

dnaE

0.710

rpsB

0.707

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaE	dnaX	AFE_1461	AFE_1919	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.986
dnaE	holC	AFE_1461	AFE_2203	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	0.981
dnaE	polI	AFE_1461	AFE_3094	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.490
dnaE	rpsB	AFE_1461	AFE_1444	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Ribosomal protein S2; Identified by similarity to SP:P02351; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.526
dnaE	ssb-1	AFE_1461	AFE_2845	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.710
dnaE	ssb-2	AFE_1461	AFE_1569	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.672
dnaE	ssb-3	AFE_1461	AFE_1260	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.710
dnaX	dnaE	AFE_1919	AFE_1461	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.986
dnaX	holC	AFE_1919	AFE_2203	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	0.988
dnaX	polI	AFE_1919	AFE_3094	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.446
dnaX	ssb-1	AFE_1919	AFE_2845	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.792
dnaX	ssb-2	AFE_1919	AFE_1569	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.792
dnaX	ssb-3	AFE_1919	AFE_1260	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.792
holC	dnaE	AFE_2203	AFE_1461	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.981
holC	dnaX	AFE_2203	AFE_1919	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.988
holC	ssb-1	AFE_2203	AFE_2845	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.933
holC	ssb-2	AFE_2203	AFE_1569	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.933
holC	ssb-3	AFE_2203	AFE_1260	DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.	Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.933
polI	dnaE	AFE_3094	AFE_1461	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.490
polI	dnaX	AFE_3094	AFE_1919	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.446

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