AFE_2861 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AFE_2861

Secretion protein, HlyD family; Identified by match to protein family HMM PF00529. (345 aa)

Predicted Functional Partners:

AFE_2862

0.950

AFE_2863

0.949

AFE_2864

0.949

AFE_1603

0.782

AFE_1604

0.781

AFE_2865

0.773

AFE_1606

0.729

AFE_1605

0.712

AFE_0654

0.583

AFE_0039

0.515

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AFE_0039	AFE_2861	RND efflux system, drug efflux transporter, outer membrane lipoprotein; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.515
AFE_0654	AFE_2861	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.583
AFE_1603	AFE_1604	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.804
AFE_1603	AFE_1605	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.995
AFE_1603	AFE_1606	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.995
AFE_1603	AFE_2861	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.782
AFE_1603	AFE_2862	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.977
AFE_1604	AFE_1603	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.804
AFE_1604	AFE_1605	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.994
AFE_1604	AFE_1606	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.995
AFE_1604	AFE_2861	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.781
AFE_1604	AFE_2862	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.981
AFE_1605	AFE_1603	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.995
AFE_1605	AFE_1604	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.994
AFE_1605	AFE_1606	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	0.778
AFE_1605	AFE_2861	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Secretion protein, HlyD family; Identified by match to protein family HMM PF00529.	0.712
AFE_1605	AFE_2863	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.981
AFE_1605	AFE_2864	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.981
AFE_1606	AFE_1603	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; match to protein family HMM PF01061.	0.995
AFE_1606	AFE_1604	ABC transporter, ATP-binding protein; Identified by similarity to SP:P75776; match to protein family HMM PF00005.	ABC transporter, permease protein, putative; Identified by similarity to SP:P75775; match to protein family HMM PF01061.	0.995