AFE_2934 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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co-expression

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gene fusions

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Score

AFE_2934

Transcriptional regulator, putative; Identified by match to protein family HMM PF00486. (254 aa)

Predicted Functional Partners:

phoR

0.959

kdpE

0.717

AFE_2319

0.684

AFE_0106

0.677

AFE_0107

0.644

AFE_2318

0.635

AFE_3275

0.621

AFE_0449

0.602

AFE_3274

0.592

rpoA

0.557

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0106	AFE_0107	AFE_0106	AFE_0107	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.996
AFE_0106	AFE_2318	AFE_0106	AFE_2318	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.927
AFE_0106	AFE_2319	AFE_0106	AFE_2319	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.985
AFE_0106	AFE_2934	AFE_0106	AFE_2934	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Transcriptional regulator, putative; Identified by match to protein family HMM PF00486.	0.677
AFE_0106	AFE_3274	AFE_0106	AFE_3274	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Transcriptional regulator OmpR, putative; Identified by similarity to SP:P03025; match to protein family HMM PF00072; match to protein family HMM PF00486.	0.985
AFE_0106	AFE_3275	AFE_0106	AFE_3275	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Osmolarity sensor protein EnvZ, putative; Identified by similarity to SP:P02933; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.920
AFE_0106	kdpE	AFE_0106	AFE_2228	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator KdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.753
AFE_0106	phoR	AFE_0106	AFE_1435	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Phosphate regulon sensor protein PhoR; Identified by similarity to SP:P08400; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR02966.	0.813
AFE_0107	AFE_0106	AFE_0107	AFE_0106	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.996
AFE_0107	AFE_0449	AFE_0107	AFE_0449	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.843
AFE_0107	AFE_2318	AFE_0107	AFE_2318	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.985
AFE_0107	AFE_2319	AFE_0107	AFE_2319	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.911
AFE_0107	AFE_2934	AFE_0107	AFE_2934	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Transcriptional regulator, putative; Identified by match to protein family HMM PF00486.	0.644
AFE_0107	AFE_3274	AFE_0107	AFE_3274	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Transcriptional regulator OmpR, putative; Identified by similarity to SP:P03025; match to protein family HMM PF00072; match to protein family HMM PF00486.	0.907
AFE_0107	AFE_3275	AFE_0107	AFE_3275	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Osmolarity sensor protein EnvZ, putative; Identified by similarity to SP:P02933; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.985
AFE_0107	phoR	AFE_0107	AFE_1435	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Phosphate regulon sensor protein PhoR; Identified by similarity to SP:P08400; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR02966.	0.827
AFE_0107	rpoA	AFE_0107	AFE_0354	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.557
AFE_0449	AFE_0107	AFE_0449	AFE_0107	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.843
AFE_0449	AFE_2319	AFE_0449	AFE_2319	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.848
AFE_0449	AFE_2934	AFE_0449	AFE_2934	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Transcriptional regulator, putative; Identified by match to protein family HMM PF00486.	0.602