AFE_3054 protein (Acidithiobacillus ferrooxidans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_1297	AFE_3054	AFE_1297	AFE_3054	Cobalamin biosynthesis protein, CobS family; Identified by match to protein family HMM PF07728.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.630
AFE_1681	AFE_3054	AFE_1681	AFE_3054	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.437
AFE_1681	cab2	AFE_1681	AFE_1688	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	0.887
AFE_1681	cbbS-2	AFE_1681	AFE_1690	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.513
AFE_1681	p30	AFE_1681	AFE_1678	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	P30 protein; Identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406.	0.606
AFE_2536	AFE_3054	AFE_2536	AFE_3054	CbbQ/NirQ/NorQ/GpvN family protein; Identified by similarity to SP:Q02441; similarity to SP:Q51858; match to protein family HMM PF07728; match to protein family HMM PF08406.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.873
AFE_3054	AFE_1297	AFE_3054	AFE_1297	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Cobalamin biosynthesis protein, CobS family; Identified by match to protein family HMM PF07728.	0.630
AFE_3054	AFE_1681	AFE_3054	AFE_1681	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	0.437
AFE_3054	AFE_2536	AFE_3054	AFE_2536	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	CbbQ/NirQ/NorQ/GpvN family protein; Identified by similarity to SP:Q02441; similarity to SP:Q51858; match to protein family HMM PF07728; match to protein family HMM PF08406.	0.873
AFE_3054	cab2	AFE_3054	AFE_1688	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	0.401
AFE_3054	cbbL-1	AFE_3054	AFE_3051	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.	0.598
AFE_3054	cbbQ-1	AFE_3054	AFE_3053	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	CbbQ protein; Identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406.	0.950
AFE_3054	cbbQ-2	AFE_3054	AFE_2156	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	CbbQ protein; Identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406.	0.877
AFE_3054	cbbS-1	AFE_3054	AFE_3052	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.818
AFE_3054	cbbS-2	AFE_3054	AFE_1690	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.684
AFE_3054	p30	AFE_3054	AFE_1678	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	P30 protein; Identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406.	0.879
cab2	AFE_1681	AFE_1688	AFE_1681	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	Conserved hypothetical protein; Identified by similarity to GB:CAE21373.1.	0.887
cab2	AFE_3054	AFE_1688	AFE_3054	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.401
cab2	cbbL-1	AFE_1688	AFE_3051	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.	0.636
cab2	cbbS-1	AFE_1688	AFE_3052	Carboxysome shell carbonic anhydrase; Identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.802