AFE_3100 protein (Acidithiobacillus ferrooxidans)

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AFE_3100

Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426. (135 aa)

Predicted Functional Partners:

uvrD

0.729

pilD

0.574

cbpA

0.516

pilC

0.490

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_3100	cbpA	AFE_3100	AFE_3102	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Curved DNA-binding protein; Identified by similarity to SP:P36659; match to protein family HMM PF00226; match to protein family HMM PF01556.	0.516
AFE_3100	pilC	AFE_3100	AFE_0972	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Type IV pilus biogenesis protein PilC; Identified by similarity to SP:P45793; match to protein family HMM PF00482.	0.490
AFE_3100	pilD	AFE_3100	AFE_0186	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.574
AFE_3100	uvrD	AFE_3100	AFE_3101	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	DNA helicase II; Identified by match to protein family HMM PF00580.	0.729
cbpA	AFE_3100	AFE_3102	AFE_3100	Curved DNA-binding protein; Identified by similarity to SP:P36659; match to protein family HMM PF00226; match to protein family HMM PF01556.	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.516
cbpA	uvrD	AFE_3102	AFE_3101	Curved DNA-binding protein; Identified by similarity to SP:P36659; match to protein family HMM PF00226; match to protein family HMM PF01556.	DNA helicase II; Identified by match to protein family HMM PF00580.	0.578
pilC	AFE_3100	AFE_0972	AFE_3100	Type IV pilus biogenesis protein PilC; Identified by similarity to SP:P45793; match to protein family HMM PF00482.	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.490
pilC	pilD	AFE_0972	AFE_0186	Type IV pilus biogenesis protein PilC; Identified by similarity to SP:P45793; match to protein family HMM PF00482.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.914
pilD	AFE_3100	AFE_0186	AFE_3100	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.574
pilD	pilC	AFE_0186	AFE_0972	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Type IV pilus biogenesis protein PilC; Identified by similarity to SP:P45793; match to protein family HMM PF00482.	0.914
uvrD	AFE_3100	AFE_3101	AFE_3100	DNA helicase II; Identified by match to protein family HMM PF00580.	Competence protein ComEA helix-hairpin-helix repeat protein; Identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.729
uvrD	cbpA	AFE_3101	AFE_3102	DNA helicase II; Identified by match to protein family HMM PF00580.	Curved DNA-binding protein; Identified by similarity to SP:P36659; match to protein family HMM PF00226; match to protein family HMM PF01556.	0.578

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