Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFE_3116Conserved hypothetical protein; Identified by similarity to PIR:C69319. (128 aa)    
Predicted Functional Partners:
AFE_3117
Conserved hypothetical protein; Identified by similarity to SP:O29695; match to protein family HMM PF01206.
 
  
 0.885
AFE_3118
Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.
 
     0.880
AFE_2601
Pyridine nucleotide-disulfide oxidoreductase; Identified by similarity to SP:Q9R112; match to protein family HMM PF07992.
 
     0.760
AFE_2600
Conserved hypothetical protein; Identified by similarity to SP:O29695; match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
 
  
 0.702
AFE_2019
Conserved domain protein.
  
     0.647
AFE_1547
Membrane protein, putative; Identified by match to protein family HMM PF07690.
  
     0.639
AFE_3090
Membrane protein, putative; Identified by match to protein family HMM PF07690.
  
     0.615
AFE_3099
Hypothetical protein; Identified by glimmer; putative.
  
     0.588
AFE_0967
Type IV pilin biogenesis protein, putative; Identified by similarity to GB:AAQ58159.1.
  
     0.560
AFE_2307
Conserved domain protein; Identified by similarity to GB:AAO90256.1.
  
     0.502
Your Current Organism:
Acidithiobacillus ferrooxidans
NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.