STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFE_3151Conserved hypothetical protein; Identified by similarity to GB:CAA07033.2. (183 aa)    
Predicted Functional Partners:
AFE_2041
Membrane protein, putative.
  
  
 0.817
coxB
Cytochrome c oxidase, aa3-type, subunit II; Identified by similarity to GB:CAA07034.1; match to protein family HMM PF00116.
       0.751
coxA
Cytochrome c oxidase, aa3-type, subunit I; Identified by similarity to GB:CAA07035.1; match to protein family HMM PF00115.
       0.583
coxC
Cytochrome c oxidase, aa3-type, subunit III; Identified by similarity to GB:CAA07036.1.
       0.548
cyc1
Cytochrome c552; Identified by similarity to SP:P74917; match to protein family HMM PF00034.
       0.526
cyc2
Cytochrome c; Identified by similarity to GB:CAA07031.1.
       0.519
coxD
Cytochrome c oxidase, aa3-type, subunit IV; Identified by similarity to GB:BAC22706.1.
       0.465
Your Current Organism:
Acidithiobacillus ferrooxidans
NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.