AFE_3254 protein (Acidithiobacillus ferrooxidans)

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Score

AFE_3254

Identified by match to protein family HMM PF00459. (275 aa)

Predicted Functional Partners:

AFE_0669

0.924

nusG

0.713

AFE_3255

0.712

nusA

0.698

glpX

0.673

rpoZ

0.667

rpoB

0.660

rpoC

0.660

tkt-2

0.537

AFE_3257

0.537

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0669	AFE_3254	AFE_0669	AFE_3254	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	Identified by match to protein family HMM PF00459.	0.924
AFE_0669	nusA	AFE_0669	AFE_0390	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	Transcription termination factor NusA; Participates in both transcription termination and antitermination.	0.698
AFE_0669	nusG	AFE_0669	AFE_0314	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.	0.713
AFE_0669	rpoB	AFE_0669	AFE_0320	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.660
AFE_0669	rpoC	AFE_0669	AFE_0321	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.660
AFE_0669	rpoZ	AFE_0669	AFE_0564	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.667
AFE_3254	AFE_0669	AFE_3254	AFE_0669	Identified by match to protein family HMM PF00459.	Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	0.924
AFE_3254	AFE_3255	AFE_3254	AFE_3255	Identified by match to protein family HMM PF00459.	Conserved hypothetical protein; Identified by similarity to GB:CAD85827.1.	0.712
AFE_3254	AFE_3257	AFE_3254	AFE_3257	Identified by match to protein family HMM PF00459.	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	0.537
AFE_3254	glpX	AFE_3254	AFE_3253	Identified by match to protein family HMM PF00459.	Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330.	0.673
AFE_3254	nusA	AFE_3254	AFE_0390	Identified by match to protein family HMM PF00459.	Transcription termination factor NusA; Participates in both transcription termination and antitermination.	0.698
AFE_3254	nusG	AFE_3254	AFE_0314	Identified by match to protein family HMM PF00459.	Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.	0.713
AFE_3254	rpoB	AFE_3254	AFE_0320	Identified by match to protein family HMM PF00459.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.660
AFE_3254	rpoC	AFE_3254	AFE_0321	Identified by match to protein family HMM PF00459.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.660
AFE_3254	rpoZ	AFE_3254	AFE_0564	Identified by match to protein family HMM PF00459.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.667
AFE_3254	tkt-2	AFE_3254	AFE_3252	Identified by match to protein family HMM PF00459.	Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; Belongs to the transketolase family.	0.537
AFE_3255	AFE_3254	AFE_3255	AFE_3254	Conserved hypothetical protein; Identified by similarity to GB:CAD85827.1.	Identified by match to protein family HMM PF00459.	0.712
AFE_3255	AFE_3257	AFE_3255	AFE_3257	Conserved hypothetical protein; Identified by similarity to GB:CAD85827.1.	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	0.558
AFE_3255	glpX	AFE_3255	AFE_3253	Conserved hypothetical protein; Identified by similarity to GB:CAD85827.1.	Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330.	0.550
AFE_3255	tkt-2	AFE_3255	AFE_3252	Conserved hypothetical protein; Identified by similarity to GB:CAD85827.1.	Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; Belongs to the transketolase family.	0.485