STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0101Molybdopterin oxidoreductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1033 aa)    
Predicted Functional Partners:
DET0102
Molybdopterin oxidoreductase, membrane subunit, putative.
 
 
 0.981
DET0103
Molybdopterin oxidoreductase, iron-sulfur binding subunit, putative; Identified by similarity to SP:P32708.
 
 
 0.980
DET0112
[Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit, putative; Identified by similarity to SP:P33389.
 
 
 0.944
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.882
DET0186
Formate dehydrogenase, membrane subunit, putative.
 
 
 0.850
mobA
mobA family protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
  
 0.836
DET0100
Membrane protein, putative.
       0.709
DET0214
Iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative; Identified by similarity to SP:P19499; match to protein family HMM PF04422.
  
 
 0.652
DET0729
[Fe] hydrogenase, HymB subunit, putative; Identified by similarity to GP:14250934.
  
  
 0.604
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.534
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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