STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0117Transcriptional regulator, putative; Identified by similarity to GB:AAN59033.1. (190 aa)    
Predicted Functional Partners:
DET0754
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.485
cetZ
GTPase domain, tubulin/FtsZ family protein; Involved in cell shape control; Belongs to the CetZ family.
  
 
   0.455
DET0352
Conserved hypothetical protein; Identified by similarity to GB:BAC73118.1.
  
     0.450
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.441
DET0114
ABC transporter, substrate-binding protein, putative; Identified by similarity to SP:P46904.
 
     0.437
DET0118
Identified by match to protein family HMM TIGR01383.
       0.424
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.