Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DET0127Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229. (1061 aa)    
Predicted Functional Partners:
DET0130
Response regulator; Identified by similarity to SP:P13792.
 
 
 
 0.911
DET1294
DNA-binding response regulator; Identified by match to protein family HMM TIGR01764.
 
 
 
 0.902
DET0624
Response regulator; Identified by similarity to OMNI:TM0186; match to protein family HMM TIGR00277.
 
 
 
 0.898
DET0171
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 
 
0.888
DET0625
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 
 
0.881
DET1016
Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM TIGR00229; match to protein family HMM TIGR01612.
 
 
 
0.878
DET0131
Response regulator; Identified by similarity to SP:Q00934.
 
 
 
 0.801
DET0136
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL01BH3159; match to protein family HMM TIGR00229.
 
 
 
0.793
DET0177
DNA-binding response regulator.
 
 
 
 0.789
DET0233
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL02MA3318; match to protein family HMM TIGR00229.
 
 
 
0.789
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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