STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0130Response regulator; Identified by similarity to SP:P13792. (123 aa)    
Predicted Functional Partners:
DET0136
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL01BH3159; match to protein family HMM TIGR00229.
  0.986
DET1162
Transcriptional regulator, putative.
  
  
  0.949
DET0127
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 
 
 0.948
DET1126
Transcriptional regulator; Identified by similarity to SP:Q05943.
  
  
  0.945
DET0171
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 0.924
DET0301
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 0.915
DET0625
Sensory box sensor histidine kinase; Identified by match to protein family HMM TIGR00229.
 
 
 0.914
DET1539
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL02MA1116; match to protein family HMM TIGR00229.
 
 0.903
DET0305
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL01MM3099; match to protein family HMM TIGR00229.
 
 0.902
DET0233
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL02MA3318; match to protein family HMM TIGR00229.
 
 0.901
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.