STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoUPhosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. (221 aa)    
Predicted Functional Partners:
DET0140
Phosphate ABC transporter, permease protein.
  
 0.998
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
 0.998
DET0139
Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.961
DET0138
Phosphate ABC transporter, phosphate-binding protein; Identified by match to protein family HMM TIGR02136.
 
  
 0.873
arsC
Arsenate reductase; Identified by similarity to SP:P30330; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.794
DET0136
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL01BH3159; match to protein family HMM TIGR00229.
 
   
 0.631
DET0033
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01CA3047.
    
 0.481
gltB
Glutamate synthase, alpha subunit, putative; Belongs to the glutamate synthase family.
      
 0.453
glnA
Glutamine synthetase, type I; Identified by similarity to SP:Q59812; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
     
 0.450
lepB
Signal peptidase I; Identified by similarity to SP:P72365; match to protein family HMM PF00461; Belongs to the peptidase S26 family.
  
    0.435
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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