STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DET0146[Fe] hydrogenase, HymB subunit, putative; Identified by similarity to GP:5650749; match to protein family HMM PF01512. (417 aa)    
Predicted Functional Partners:
DET0145
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:2865515.
 0.998
DET0866
Hydrogenase subunit, putative; Identified by similarity to SP:P76440.
 
 0.997
DET0123
Pyridine nucleotide-disulphide oxidoreductase family protein.
 
 0.992
DET0147
[Fe] hydrogenase, large subunit HymC, putative; Identified by similarity to GP:14250935; match to protein family HMM PF02256.
 
 
 0.989
DET0446
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:2865515.
 
 0.986
DET0728
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:14250933.
 
 0.982
DET0863
Hydrogenase subunit HymA, putative; Identified by similarity to GP:14250933.
 
 0.981
nuoB
Proton-translocating NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 0.977
nuoD
Proton-translocating NADH-quinone oxidoreductase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
 0.972
DET0865
Hydrogenase subunit HymC, putative; Identified by similarity to GP:1032477.
 
 0.966
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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