STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0147[Fe] hydrogenase, large subunit HymC, putative; Identified by similarity to GP:14250935; match to protein family HMM PF02256. (573 aa)    
Predicted Functional Partners:
DET0145
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:2865515.
 
 
 0.989
DET0146
[Fe] hydrogenase, HymB subunit, putative; Identified by similarity to GP:5650749; match to protein family HMM PF01512.
 
 
 0.989
DET0729
[Fe] hydrogenase, HymB subunit, putative; Identified by similarity to GP:14250934.
 
 
 0.984
DET0864
Hydrogenase subunit HymB, putative; Identified by similarity to GP:14250934.
 
 
 0.984
DET0123
Pyridine nucleotide-disulphide oxidoreductase family protein.
 
 
 0.976
DET1571
Hydrogenase, group 4, HycE subunit, putative; Identified by similarity to SP:P77329; match to protein family HMM PF00346.
  
 
 0.974
DET1565
Iron-sulfur cluster-binding protein.
  
 
 0.965
DET0728
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:14250933.
 
 
 0.962
DET0863
Hydrogenase subunit HymA, putative; Identified by similarity to GP:14250933.
 
 
 0.961
DET0446
[Fe] hydrogenase, HymA subunit, putative; Identified by similarity to GP:2865515.
 
 
 0.960
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.