STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhAPhosphoheptose isomerase; Identified by similarity to SP:Q9AGY7. (216 aa)    
Predicted Functional Partners:
DET0206
D-glycero-D-manno-heptose 7-phosphate kinase, putative; Identified by similarity to GP:13491143.
 
 0.999
DET0202
Histidinol-phosphate phosphatase family protein/glycosyl transferase, group 2 family protein; Identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
 
 0.998
DET1002
Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:NTL01CG0396.
  
 0.917
DET0204
NAD-dependent epimerase/dehydratase family protein.
 
  
 0.829
DET0205
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase; Identified by similarity to GP:13491145.
 
  
 0.814
DET0209
Membrane protein, putative.
       0.705
DET0208
Glycosyl transferase, group 2 family protein.
       0.686
DET0203
Glycosyl transferase, group 2 family protein.
       0.682
DET0210
Conserved domain protein.
 
 
 
 0.639
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.574
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.