STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0214Iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative; Identified by similarity to SP:P19499; match to protein family HMM PF04422. (428 aa)    
Predicted Functional Partners:
DET0614
Hydrogenase, group 3, VhuG subunit, putative; Identified by similarity to GP:1747407.
 
 
 0.951
DET0110
[Ni/Fe] hydrogenase, group 1, large subunit, putative; Identified by similarity to SP:P21852; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.939
DET0616
Hydrogenase maturation protease; Identified by similarity to SP:P19930; match to protein family HMM TIGR00072.
 
 
 0.923
DET0215
Polysaccharide biosynthesis protein.
       0.787
DET0101
Molybdopterin oxidoreductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.652
DET0187
Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.652
DET1127
Conserved hypothetical protein; Identified by similarity to OMNI:TM0394.
   
   0.560
DET0216
Conserved domain protein; Identified by similarity to OMNI:DRA0063; match to protein family HMM PF02585.
       0.532
DET0213
Conserved domain protein; Identified by similarity to OMNI:NTL01MT00337.
 
     0.441
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.