Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DET0218 | DET0219 | DET0218 | DET0219 | DNA-binding protein, putative; Identified by match to protein family HMM PF02001; Belongs to the UPF0251 family. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.522 |
| DET0219 | DET0218 | DET0219 | DET0218 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | DNA-binding protein, putative; Identified by match to protein family HMM PF02001; Belongs to the UPF0251 family. | 0.522 |
| DET0219 | DET0220 | DET0219 | DET0220 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | Hypothetical protein; Identified by Glimmer2; putative. | 0.443 |
| DET0219 | efp-1 | DET0219 | DET0714 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.893 |
| DET0219 | efp-2 | DET0219 | DET0870 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.893 |
| DET0219 | guaA | DET0219 | DET0836 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.487 |
| DET0219 | nuoH | DET0219 | DET0927 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | Proton-translocating NADH-quinone oxidoreductase, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.432 |
| DET0220 | DET0219 | DET0220 | DET0219 | Hypothetical protein; Identified by Glimmer2; putative. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.443 |
| efp-1 | DET0219 | DET0714 | DET0219 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.893 |
| efp-1 | guaA | DET0714 | DET0836 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.668 |
| efp-2 | DET0219 | DET0870 | DET0219 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.893 |
| efp-2 | guaA | DET0870 | DET0836 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.668 |
| guaA | DET0219 | DET0836 | DET0219 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.487 |
| guaA | efp-1 | DET0836 | DET0714 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.668 |
| guaA | efp-2 | DET0836 | DET0870 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.668 |
| nuoH | DET0219 | DET0927 | DET0219 | Proton-translocating NADH-quinone oxidoreductase, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130. | 0.432 |