Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DET0237Transcriptional regulator, putative; Identified by similarity to GP:7710206. (406 aa)    
Predicted Functional Partners:
DET0235
Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409.
 
 
 0.959
DET0088
Reductive dehalogenase domain protein; Identified by similarity to GP:8163916.
 
 
 0.952
DET0123
Pyridine nucleotide-disulphide oxidoreductase family protein.
  
 
 0.920
DET0864
Hydrogenase subunit HymB, putative; Identified by similarity to GP:14250934.
  
 
 0.901
DET0191
Iron-sulfur cluster-binding protein.
  
 
 0.835
DET0868
Hydrogenase, EchF subunit, putative; Identified by similarity to GP:3005972.
  
 
 0.835
DET0928
Proton-translocating NADH-quinone oxidoreductase, I subunit; Identified by similarity to SP:Q00236.
  
 
 0.835
DET1535
Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409.
 
 
 0.799
DET1595
ApbE/NosX family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.736
DET0876
Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409.
  
     0.718
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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