STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0306Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409. (505 aa)    
Predicted Functional Partners:
DET1598
Transcriptional regulator, putative; Identified by similarity to GP:7710206.
  
     0.703
DET1596
Transcriptional regulator, putative; Identified by similarity to GP:7710206.
 
     0.694
DET0237
Transcriptional regulator, putative; Identified by similarity to GP:7710206.
 
     0.693
DET0307
Reductive dehalogenase anchoring protein, putative; Identified by similarity to GP:27228279.
       0.664
DET0114
ABC transporter, substrate-binding protein, putative; Identified by similarity to SP:P46904.
  
     0.580
DET0308
Conserved domain protein; Identified by similarity to SP:Q58075.
       0.500
DET0754
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.499
DET0755
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.437
DET0352
Conserved hypothetical protein; Identified by similarity to GB:BAC73118.1.
  
     0.410
DET0610
Membrane protein, putative; Identified by similarity to GP:20905475.
  
     0.409
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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