STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0520Daunorubicin resistance ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:TM1403; match to protein family HMM TIGR01188. (316 aa)    
Predicted Functional Partners:
DET0519
ABC transporter, permease protein, putative; Identified by similarity to OMNI:NTL01BMA0802.
 
    0.926
DET0944
High-affinity branched-chain amino acid ABC transporter, permease protein, putative; Identified by similarity to SP:P22729; Belongs to the binding-protein-dependent transport system permease family.
 
      0.845
DET0795
ABC transporter, permease protein; Identified by similarity to SP:P75774.
    0.802
DET1179
ABC transporter, ATP-binding/permease protein; Identified by similarity to OMNI:NTL01TT2326.
   
0.791
DET1180
ABC transporter, ATP-binding/permease protein; Identified by similarity to OMNI:NTL03CP0527.
 
 
0.791
mtnA
Translation initiation factor, putative, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.773
DET0411
Putative NodJ; Identified by similarity to SP:P55475.
 
    0.728
DET1620
Membrane protein, putative.
 
 
 0.722
DET0814
ABC transporter, permease protein; Identified by similarity to OMNI:NTL01CG1421.
    0.711
metK-2
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
   0.596
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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