STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0522Conserved hypothetical protein; Identified by similarity to OMNI:NTL01ML1916. (137 aa)    
Predicted Functional Partners:
DET1036
Serine protease, DegP/HtrA family; Identified by similarity to SP:P09376.
    
  0.791
DET1037
Serine protease, DegP/HtrA family; Identified by similarity to SP:O34358; similarity to SP:P09376.
    
  0.791
DET1285
Serine protease, DegP/HtrA family; Identified by similarity to SP:O34358.
    
  0.791
DET1286
Serine protease, DegP/HtrA family; Identified by similarity to SP:P09376; match to protein family HMM PF00089.
    
  0.791
DET0521
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01OI0672.
       0.773
DET0600
Soluble hydrogenase, tritium exchange subunit; Identified by similarity to SP:P16421.
   
 
  0.729
ilvB
Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF02776; match to protein family HMM TIGR00118.
    
 0.645
DET1321
Acetyltransferase, GNAT family; Identified by similarity to GP:29897287.
    
 0.645
DET0825
2-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM TIGR00977; Belongs to the alpha-IPM synthase/homocitrate synthase family.
   
 
  0.568
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
   
 
  0.568
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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