STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0526pmbA/tldD family protein. (433 aa)    
Predicted Functional Partners:
DET0527
TldD/PmbA family protein; Identified by similarity to SP:P46473.
 
    
0.869
DET0523
Acetyltransferase, GNAT family; Identified by similarity to GP:23978678.
       0.752
DET0524
PBS lyase HEAT-like repeat domain protein.
       0.752
DET0525
Conserved hypothetical protein; Identified by similarity to OMNI:AF0525.
       0.752
DET0528
Identified by match to protein family HMM PF02880.
       0.529
DET0529
Glucose-1-phosphate thymidylyltransferase; Identified by similarity to GP:1814004.
       0.529
DET0530
Glucose-1-phosphate thymidylyltransferase; Identified by similarity to SP:P08075.
       0.504
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.504
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.