Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DET0527TldD/PmbA family protein; Identified by similarity to SP:P46473. (458 aa)    
Predicted Functional Partners:
DET0526
pmbA/tldD family protein.
 
    
0.860
DET0523
Acetyltransferase, GNAT family; Identified by similarity to GP:23978678.
       0.752
DET0524
PBS lyase HEAT-like repeat domain protein.
       0.752
DET0525
Conserved hypothetical protein; Identified by similarity to OMNI:AF0525.
       0.752
DET0528
Identified by match to protein family HMM PF02880.
  
    0.529
DET0529
Glucose-1-phosphate thymidylyltransferase; Identified by similarity to GP:1814004.
       0.529
DET0530
Glucose-1-phosphate thymidylyltransferase; Identified by similarity to SP:P08075.
       0.504
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.504
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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