STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0610Membrane protein, putative; Identified by similarity to GP:20905475. (179 aa)    
Predicted Functional Partners:
DET0611
Conserved hypothetical protein; Identified by similarity to GP:5199108.
       0.686
DET0609
Hypothetical protein; Identified by Glimmer2; putative.
       0.586
DET0612
Histone acetyltransferase, ELP3 family; Identified by match to protein family HMM TIGR01211.
       0.503
DET0180
Reductive dehalogenase, putative; Identified by similarity to GP:3002555; similarity to GP:5531941; match to protein family HMM TIGR01409.
  
     0.468
DET0613
Hypothetical protein; Identified by Glimmer2; putative.
       0.459
DET0021
Conserved hypothetical protein; Identified by similarity to OMNI:MJ1433.
  
     0.441
DET1171
Reductive dehalogenase, putative; Identified by similarity to GP:3002555; similarity to GP:5531941; match to protein family HMM TIGR01409.
  
     0.427
DET0235
Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409.
  
     0.418
DET0306
Reductive dehalogenase, putative; Identified by similarity to GP:8163916; match to protein family HMM TIGR01409.
  
     0.409
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.