STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0613Hypothetical protein; Identified by Glimmer2; putative. (30 aa)    
Predicted Functional Partners:
DET0612
Histone acetyltransferase, ELP3 family; Identified by match to protein family HMM TIGR01211.
       0.697
DET0614
Hydrogenase, group 3, VhuG subunit, putative; Identified by similarity to GP:1747407.
       0.529
DET0611
Conserved hypothetical protein; Identified by similarity to GP:5199108.
       0.511
DET0615
Hydrogenase, group 3, VhuA subunit, putative; Identified by similarity to GP:1747408; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.468
DET0616
Hydrogenase maturation protease; Identified by similarity to SP:P19930; match to protein family HMM TIGR00072.
       0.468
DET0610
Membrane protein, putative; Identified by similarity to GP:20905475.
       0.459
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.