STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DET0795ABC transporter, permease protein; Identified by similarity to SP:P75774. (339 aa)    
Predicted Functional Partners:
DET0794
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:TM0389.
    0.929
DET0813
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01LI0916.
 
    0.846
DET0520
Daunorubicin resistance ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:TM1403; match to protein family HMM TIGR01188.
    0.809
nodI
Nodulation ATP-binding protein I; Identified by similarity to SP:P23703.
 
    0.710
DET1339
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL02MA1555.
 
    0.648
DET1619
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01TT2024.
 
    0.548
DET0645
Nitroreductase family protein.
   
    0.428
DET0679
Nitroreductase family protein; Identified by similarity to OMNI:NTL01CA1531.
   
    0.428
DET0824
Nitroreductase family protein.
   
    0.428
DET0793
Hypothetical protein; Identified by Glimmer2; putative.
       0.416
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.