STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0861Hydrogenase, EchB subunit, putative; Identified by similarity to GP:3005968. (282 aa)    
Predicted Functional Partners:
DET0860
Hydrogenase, EchA subunit, putative; Identified by similarity to GP:3005967.
   
 0.994
DET1571
Hydrogenase, group 4, HycE subunit, putative; Identified by similarity to SP:P77329; match to protein family HMM PF00346.
 
 
 0.991
DET0862
Hydrogenase, group 4, EchC subunit, putative; Identified by similarity to GP:3005969.
 
 
 0.989
DET0867
Hydrogenase, group 4, EchE subunit, putative; Identified by similarity to GP:3005971.
 
 
 0.980
DET0868
Hydrogenase, EchF subunit, putative; Identified by similarity to GP:3005972.
 
 
 0.960
DET0866
Hydrogenase subunit, putative; Identified by similarity to SP:P76440.
  
 
 0.870
DET1570
Hydrogenase, group 4, HycG subunit, putative; Identified by similarity to SP:P77668.
  
 
 0.834
DET1572
Hydrogenase, membrane subunit, putative; Identified by similarity to SP:P77437.
 
 
 0.796
DET0864
Hydrogenase subunit HymB, putative; Identified by similarity to GP:14250934.
     
 0.783
DET0863
Hydrogenase subunit HymA, putative; Identified by similarity to GP:14250933.
       0.773
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.