STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0867Hydrogenase, group 4, EchE subunit, putative; Identified by similarity to GP:3005971. (359 aa)    
Predicted Functional Partners:
DET0862
Hydrogenase, group 4, EchC subunit, putative; Identified by similarity to GP:3005969.
 
 0.998
DET0861
Hydrogenase, EchB subunit, putative; Identified by similarity to GP:3005968.
 
 
 0.980
DET0868
Hydrogenase, EchF subunit, putative; Identified by similarity to GP:3005972.
 
 
 0.961
nuoB
Proton-translocating NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
     0.952
DET1570
Hydrogenase, group 4, HycG subunit, putative; Identified by similarity to SP:P77668.
 
 
 0.947
DET0860
Hydrogenase, EchA subunit, putative; Identified by similarity to GP:3005967.
 
   
 0.932
DET0866
Hydrogenase subunit, putative; Identified by similarity to SP:P76440.
  
 
 0.868
DET1572
Hydrogenase, membrane subunit, putative; Identified by similarity to SP:P77437.
 
 
 0.799
DET0864
Hydrogenase subunit HymB, putative; Identified by similarity to GP:14250934.
    
 0.790
DET0865
Hydrogenase subunit HymC, putative; Identified by similarity to GP:1032477.
       0.773
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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